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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
GBM rs2913950 chr19:8394184 A/G 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2913952 chr19:8396699 A/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2913953 chr19:8396758 C/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2913954 chr19:8398597 G/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2913955 chr19:8398975 C/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2913956 chr19:8400749 C/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2972575 chr19:8394154 T/C 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2972576 chr19:8395103 G/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2972577 chr19:8396066 A/G 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs2972578 chr19:8396513 A/G 1.05E-11 143 10.57 15.13 0.73 KM Plot
GBM rs3097183 chr19:8396988 G/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs3111568 chr19:8397034 C/G 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs3111570 chr19:8392697 T/C 1.42E-11 144 11.1 13.98 0.73 KM Plot
GBM rs3115853 chr1:757640 G/A 1.03E-5 145 2.5 12.67 12.37 KM Plot
GBM rs3214554 chr19:8381595 CCT/C 0.000109 147 10.67 15.6 2.8 KM Plot